Skip to Main Content
It looks like you're using Internet Explorer 11 or older. This website works best with modern browsers such as the latest versions of Chrome, Firefox, Safari, and Edge. If you continue with this browser, you may see unexpected results.

Bioinformatics Software: Partek Genomics Suite (PGS)

General Information

Major Topics:

  • Gene and exon expression data
  • Copy number variation data
  • Next-generation sequencing data 
  • New Methylation workflow

 

Key Features:

  • Comprehensive topics:
    Cover all major high-throughput data analysis topics
  • Task-orientated format:
    Go through each data analysis workflows step-by-step with live demos
  • Hands-on practices:
    Demo datasets and trial Partek GS will be provided. Check Training Materials section below
  • Professional consultation:
    Bring your own data and go through analysis with the guidance of the Partek customer support team

Time: Mar.24-25, 2011

Place: Aresty Auditorium, HSC

Registration is mandatory. 

Training Agenda

Thursday March 24, 2011

Overview of Partek Genomic Suite; Microarray-based Gene Expression and Genetic Variation (SNP and copy number) Data Analysis Workflows

Xiaowen Wang, Ph.D., Field Application Specialist

  • 9:00 a.m.       Overview of Partek Genomic Suite
  • 9:45 a.m.       Morning Coffee Break
  • 10:00 a.m.     Array-based Gene Expression Data Analysis Workflow
  • 12:00 p.m.     Lunch Break
  • 1:00 p.m.       Exon Array Data Analysis Workflow
  • 1:30 p.m.       Hands-on Practices for Gene Expression Analysis
  • 2:30 p.m.       Afternoon Break
  • 2:45 p.m.       Copy Number/SNP/LOH Data Analysis Workflow
  • 5:00 p.m.       End of Day 1

Friday March 25, 2011

Next-Gen Sequencing Data Analysis: RNA-seq and ChIP-seq workflows; Methylation Data Analysis Overview

Ryan Peters, Ph.D., Field Application Specialist

  • 9:00 a.m.       RNA-seq Data Analysis Workflow and NGS Alignment Tools (Part I)
  • 10:15 a.m.     Morning Coffee Break
  • 10:30 a.m.     RNA-seq Data Analysis Workflow and NGS Alignment Tools (Part II)
  • 12:00 p.m.     Lunch Break
  • 1:00 p.m.       ChIP-seq Data Analysis Workflow
  • 3:00 p.m.       Afternoon Break
  • 3:15 p.m.       Methylation Data Analysis Workflow
  • 4:00 p.m.       Open Lab (Q&A)
  • 5:00 p.m.       End of Day 2 and the onsite training